Draft genome sequence of Janthinobacterium lividum strain MTR reveals its mechanism of capnophilic behavior

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dc.contributor.authorValdes, N.es_ES
dc.contributor.authorSoto, P.es_ES
dc.contributor.authorCottet, L.es_ES
dc.contributor.authorAlarcon, P.es_ES
dc.contributor.authorGonzalez, A.es_ES
dc.contributor.authorCastillo, A.es_ES
dc.contributor.authorCorsini, G.es_ES
dc.contributor.authorTello, M.es_ES
dc.date.accessioned2022-06-22T19:11:17Z
dc.date.available2022-06-22T19:11:17Z
dc.date.issued2015
dc.description.abstractJanthinobacterium lividum is a Gram-negative bacterium able to produce violacein, a pigment with antimicrobial and antitumor properties. Janthinobacterium lividum colonizes the skin of some amphibians and confers protection against fungal pathogens. The mechanisms underlying this association are not well understood. In order to identify the advantages for the bacterium to colonize amphibian skin we sequenced Janthinobacterium lividum strain MTR, a strain isolated from Cajón del Maipo, Chile. The strain has capnophilic behavior, with growth favored by high concentrations (5 %) of carbon dioxide. Its genome is 6,535,606 bp in size, with 5,362 coding sequences and a G + C content of 62.37 %. The presence of genes encoding for products that participate in the carbon fixation pathways (dark CAM pathways), and the entire set of genes encoding for the enzymes of the glyoxylate cycle may explain the capnophilic behavior and allow us to propose that the CO2 secreted by the skin of amphibians is the signal molecule that guides colonization by Janthinobacterium lividum. © 2015 Valdes et al.es_ES
dc.formatapplication/pdfes_ES
dc.identifier.urihttps://environmentalmicrobiome.biomedcentral.com/articles/10.1186/s40793-015-0104-zes_PE
dc.identifier.urihttps://doi.org/10.1186/s40793-015-0104-zes_PE
dc.identifier.urihttps://pubmed.ncbi.nlm.nih.gov/26605004/es_PE
dc.identifier.urihttps://pmc.ncbi.nlm.nih.gov/articles/PMC4657372/es_PE
dc.language.isoen_USes_ES
dc.publisherBioMed Central Ltd.es_ES
dc.publisher.countryUSes_ES
dc.relation.ispartofStandards in Genomic Scienceses_ES
dc.rightsinfo:eu-repo/semantics/closedAccesses_ES
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/es_ES
dc.sourceStandards in Genomic Scienceses_ES
dc.subjectBiochemistryes_ES
dc.subjectGenetics and Molecular Biologyes_ES
dc.subject.ocdehttp://purl.org/pe-repo/ocde/ford#1.06.03es_ES
dc.titleDraft genome sequence of Janthinobacterium lividum strain MTR reveals its mechanism of capnophilic behaviores_ES
dc.typeinfo:eu-repo/semantics/preprintes_ES
dc.type.versioninfo:eu-repo/semantics/publishedVersiones_ES
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